論文など

英語論文・日本語論文・著書

英語論文

1. S. Metelmann, S. Sakai, M. Kondoh, A. Telschow (2020) Evolutionary stability of plant-pollinator networks: efficient communities, hysteresis, and a pollination dilemma. Ecology Letters, online (10.1111/ele.13588)

2. T. Minamoto, M. Miya, T. Sado, S. Seino, H. Doi, M. Kondoh, K. Nakamura, T. Takahara, S. Yamamoto, H. Yamanaka, H. Araki, W. Iwasaki, A. Kasai, R. Masuda, K. Uchii (2020) An illustrated manual for environmental DNA research: Water sampling guidelines and experimental protocols. Environmental DNA, online (10.1002/edn3.121)

3. K. Fukaya, H. Murakami, S. Yoon, K. Minami, Y. Osada, S. Yamamoto, R. Masuda, A. Kasai, K. Miyashita, T. Minamoto, M. Kondoh (2020) Estimating fish population abundance by integrating quantitative data on environmental DNA and hydrodynamic modelling. Molecular Ecology: 482489.

4. M. Yamamichi, D. Kyogoku, R. Iritani, K. Kobayashi, Y. Takahashi, K. Tsurui-Sato, A. Yamawo, S. Dobata, K. Tsuji, M. Kondoh (2020) Intraspecific Adaptation Load: A Mechanism for Species Coexistence. Trends in Ecology & Evolution 35: 897-907.

5. H. Doi, K.Fukaya, S. Oka, K. Sato, M. Kondoh, M. Miya (2019) Evaluation of detection probabilities at the water-filtering and initial PCR steps in environmental DNA metabarcoding using a multispecies site occupancy model. Scientific Reports 9: 1-8.

6. H. Murakami, S. Yoon, A. Kasai, T. Minamoto, S. Yamamoto, M. K. Sakata, T. Horiuchi, H. Sawada, M. Kondoh, Y. Yamashita, R. Masuda (2019) Dispersion and degradation of environmental DNA from caged fish in a marine environment. Fisheries Science 85: 327-337.

7. D. Kyogoku, M. Kondoh, T. Sota (2019) Does past evolutionary history under different mating regimes influence the demographic dynamics of interspecific competition? Ecology and Evolution 9: 8616-8624.

8. D. Kyogoku, Y. Kataoka, M. Kondoh (2019) Who determines the timing of inflorescence closure of a sexual dandelion? Pollen donors versus recipients. Evolutionary Ecology 33: 701-712.

9. M. Ushio, C.-h. Hsieh, R. Masuda, E. R. Deyle, H. Ye, C.-W. Chang, G. Sugihara, M. Kondoh (2018) Fluctuating interaction network and time-varying stability of a natural fish community. Nature 554: 360-363.

10.  M. Ushio, H. Murakami, R. Masuda, T. Sado, M. Miya, S. Sakurai, H. Yamanaka, T. Minamoto, M. Kondoh (2018) Quantitative monitoring of multispecies fish environmental DNA using high-throughput sequencing. Metabarcoding and Metagenomics 2: e23297.

11.  K. Kawatsu, M. Kondoh (2018) Density-dependent interspecific interactions and the complexity–stability relationship. Proceedings of the Royal Society B: Biological Sciences 285: 20180698.

12.  Y. Kato, M. Kondoh, N. F. Ishikawa, H. Togashi, Y. Kohmatsu, M. Yoshimura, C. Yoshimizu, T. F. Haraguchi, Y. Osada, N. Ohte, N. Tokuchi, N. Okuda, T. Miki, I. Tayasu (2018) Using food network unfolding to evaluate food–web complexity in terms of biodiversity: theory and applications. Ecology Letters 21: 1065-1074.

13. M. Nakamura, C.-h. Hsieh, T. Miki, M. Kondoh (2017) Establishment of an ecological research network involving Taiwan and Japan: developing a better understanding of ecological phenomena unique to East Asia. Ecological Research 32: 779-781.

14. I.-C. Chen, C.-h. Hsieh, M. Kondoh, H.-J. Lin, T. Miki, M. Nakamura, T. Ohgushi, J. Urabe, T. Yoshida (2017) Ecological Research 32: 873-885.

15. M. Ushio, H. Fukuda, T. Inoue, K. Makoto, O. Kishida, K. Sato, K. Murata, M. Nikaido, T. Sado, Y. Sato, M. Takeshita, W. Iwasaki, H. Yamanaka, M. Kondoh, M. Miya (2017) Environmental DNA enables detection of terrestrial mammals from forest pond water. Molecular Ecology Resources. 17: e63-e75.

16.  N. Ishikawa, Y. Chikaraishi, N. Ohkouchi, A. R. Murakami, I. Tayasu, H. Togashi, J. Okana, Y. Sakai, T. Iwata, M. Kondoh and N. Okuda (2017) Integrated trophic position decreases in more diverse communities of stream food webs. Scientific Reports 7: 2130.

17. S. Yamamoto, R. Masuda, Y. Sato, T. Sado, H. Araki, M. Kondoh, T. Minamoto, M. Miya (2017) Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea. Scientific Reports 7: 40368.

18. S. Yamamoto, K. Minami, K. Fukaya, K. Takahashi, H. Sawada, H. Murakami, S. Tsuji, H. Hashizume, S. Kubonaga, T. Horiuchi, M. Hongo, J. Nishida, Y. Okugawa, A. Fujiwara, M. Fukuda, S. Hidaka, K. W. Suzuki, M. Miya, H. Araki, H. Yamanaka, A. Maruyama, K. Miyashita, R. Masuda, T. Minamoto, M. Kondoh (2016) Environmental DNA as a ‘Snapshot’ of Fish Distribution: A Case Study of Japanese Jack Mackerel in Maizuru Bay, Sea of Japan. PLoS One 11: e0149786.

19. M. Kondoh, A. Mougi, A. Ushimaru, K. Nakata (2016) Adaptive movement and food-chain dynamics: towards food-web theory without birth–death processes. Theoretical Ecology 9: 15-25.

20. A. Mougi and M. Kondoh (2016) Food-web complexity, meta-community complexity and community stability. Scientific Reports 6: 24478.

21. M. Miya, Y. Sato, T. Fukunaga, T. Sado, J. Y. Poulsen, K. Sato, T. Minamoto, S. Yamamoto, H. Yamanaka, H. Araki, M. Kondoh, W. Iwasaki (2015) MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species. Royal Society Open Science 2: 150088.

22. M. Kondoh and A. Mougi (2015) Interaction-type diversity hypothesis and interaction strength: the condition for the positive complexity-stability effect to arise. Population Ecology 57: 21-27.

23. A. Maruyama, K. Nakamura, H. Yamanaka, M. Kondoh, T. Minamoto (2014) The release rate of environmental DNA from juvenile and adult fish. PLoS One 9: e114639.

24. A. Mougi and M. Kondoh (2014) Stability of competition–antagonism–mutualism hybrid community and the role of community network structure. Journal of Theoretical Biology 360: 54-58.

25. A. Mougi and M. Kondoh (2014) Instability of a hybrid module of antagonistic and mutualistic interactions. Population Ecology 56: 257-263.

26. A. Mougi and M. Kondoh (2014) Adaptation in a hybrid world with multiple interaction types: a new mechanism for species coexistence. Ecological Research 29: 113-119.

27. A. Koehncke, A. Telschow and M. Kondoh (2013) Invasibility as an emergent property of native metapopulation structure. Oikos 122: 332-340.

28. A. Mougi and M. Kondoh (2012) Diversity of interaction types and ecological community stability. Science 337: 349-351.

29. T. Kuwae, E. Miyoshi, S. Hosokawa, K. Ichimi, J. Hosoya, T. Amano, T. Moriya, M. Kondoh, R. C. Ydenberg and R. W. Elner (2011) Variable and Complex Food Web Structures Revealed by Exploring Missing Trophic Links between Birds and Biofilm. Ecology Letters 15: 347-356.

30. T. Nakazawa, M. Ushio and M. Kondoh (2011) The role of body size in multispecies systems. Advances in Ecological Research 45: 269-302.

31. W. Yamaguchi, M. Kondoh and M. Kawata (2010) Effects of evolutionary changes in prey use on the relationship between food web complexity and stability. Population Ecology.

32. M. Kondoh, S. Kato and Y. Sakato (2010) Food webs are built up with nested subwebs. Ecology 91: 3123-3130.

33. T. Miki, M. Ushio, S. Fukui and M. Kondoh (2010) Functional diversity of microbial decomposers facilitates plant coexistence in a plant–microbe–soil feedback model. Proceedings of the National Academy of Sciences of the United States of America 107: 14251-14256.

34. M. Kondoh (2010) Linking learning adaptation to trophic interactions: a brain size-based approach. Functional Ecology 24:35-43.

35. M. Kondoh and K. Ninomiya (2009) Food-chain length and adaptive foraging. Proceedings of the Royal Society of London. Series B. 276: 3113-3121.

36. M. Kondoh (2008) Building trophic modules into a persistent food web. Proceedings of the National Academy of Sciences of the United States of America 105: 16631-16635.

37. M. Kondoh (2007) Anti-predator defence and the complexity-stability relationship of food webs. Proceedings of the Royal Society of London. Series B. 274: 1617-1624.

38. S. Kondoh, H. Yahata, T. Nakashizuka and M. Kondoh (2006) Interspecific variation in hydraulic conductivity and embolism among broad-leaved trees in semi-arid regions of Kenya. Tree Physiology 26: 899-904.

39. M. Kondoh (2006) Does foraging adaptation create the positive complexity-stability relationship in realistic food-web structure? Journal of Theoretical Biology 238: 646-651.

40. M. Kondoh (2003) Habitat fragmentation resulting in overgrazing by herbivores. Journal of Theoretical Biology 225: 453-460.

41. M. Kondoh (2003) Response to comment on "foraging adaptation and the relationship between food-web complexity and stability". Science 301: 918c.

42. M. Kondoh and J.-Y. Ide (2003) Evolution of periodicity in insect diverse breeding systems. Animal Behaviour 65: 1013-1020.

43. M. Kondoh (2003) Foraging adaptation and the relationship between food-web complexity and stability. Science 299: 1388-1391.

44. M. Kondoh (2003) High reproductive rates result in high predation risks - a mechanism promoting the coexistence of competing prey in spatially structured populations. The American Naturalist 161: 299-309.

45. T. Miki and M. Kondoh (2002) Feedbacks between nutrient cycling and vegetation predict plant species coexistence and invasion. Ecology Letters 5: 624-633.

46. M. Kondoh and N. Okuda (2002) Mate availability influences filial cannibalism in fish mate-seeking behaviour: a male-female coevolutionary game model. Animal Behaviour 63: 227-233.

47. M. Kondoh and I. S. Williams (2001) Compensation behaviour by insect herbivores and natural enemies: its influence on community structure. Oikos 93: 161-167.

48. M. Kondoh (2001) Unifying the relationships of species richness to productivity and disturbance. Proceedings of the Royal Society of London. Series B 268: 269-271.

49. M. Kondoh (2001) Coevolution of nuptial gift and female multiple mating resulting in with paternal care. Evolutionary Ecology Research 3: 75-89.

50. M. Kondoh and M. Higashi (2000) Reproductive isolation mechanism resulting from resolution of intragenomic conflict. The American Naturalist 156: 511-518.

51. J.-Y. Ide and M. Kondoh (2000) Male-female evolutionary game on mate-locating behaviour and evolution of mating systems in insects. Ecology Letters 3: 433-440.

日本語論文

1. 近藤倫生 (2019) (6)環境DNA分析技術が拓く新たな未来 : 生態系観測における環境DNAの役割（セミナー室 環境DNA分析技術の現状 : 実用に向けたさまざまな取り組みについて）. 化学と生物 : 日本農芸化学会会誌 : 生命・食・環境 57: 503-509.

2. 近藤倫生 (2018) 環境DNA技術 : 理論と実践,将来の展開 (特集 水環境における環境DNAを用いた生物モニタリング). 水環境学会誌 41: 118-122.

3. 近藤倫生 (2018) 環境DNA技術がもたらす未来 : 高度生態情報社会に向けて (特集 環境DNAが拓く魚類生態研究の未来). 海洋と生物 40: 60-65.

4. 近藤 倫生 (2005) 食物網の複雑性と柔軟性、個体群の安定性について. 日本生態学会誌 55: 249-261.

5. 近藤 倫生 (2002) 生物多様性パターンはどのようにして生み出されるのか？—中規模撹乱仮説と生産性仮説を統合する—. 生物科学 53: 195-203.

著書

1. 大串 隆之, 近藤 倫生, 難波 利幸 (2020) シリーズ群集生態学1「生物群集を理解する」京都大学学術出版会.

2. 近藤 倫生 (2018) 食物網. In: 動物学の百科事典( 日本動物学会 編) 丸善出版 (ISBN 4621303090).

3. M. Kondoh (2012) Stability and Resilience. (A. Hasting, L. Gross編) Encyclopedia of Theoretical Ecology. University of California Press, California, pp 624-629.（分筆）

4. 大串 隆之, 近藤 倫生, 椿 宜高 (2009) シリーズ群集生態学６「新たな保全と管理を考える」京都大学学術出版会.

5. 大串 隆之, 近藤 倫生, 難波 利幸 (2009) シリーズ群集生態学３「生物間ネットワークを紐とく」京都大学学術出版会.

6. 大串 隆之, 近藤 倫生, 吉田 丈人 (2008) シリーズ群集生態学２「進化生物学からせまる」京都大学学術出版会.

7. 大串 隆之, 近藤 倫生, 仲岡 雅裕 (2008) シリーズ群集生態学４「生態系と群集をむすぶ」京都大学学術出版会.

8. 大串 隆之, 近藤 倫生, 野田 隆史 (2008) シリーズ群集生態学５「メタ群集と空間スケール」京都大学学術出版会.

9. M. Kondoh (2006) Contact experience, alien-native interactions, and their community consequences: a theoretical consideration. In: Conceptual ecology and invasions biology: reciprocal approaches to nature (Eds. M. W. Cadotte, S. M. McMahon & T. Fukami) Kluwer Academic Press.

10. M. Kondoh (2006) Linking flexible food-web structure to population stability: a theoretical consideration on adaptive food webs. In: Dynamic Food Webs: Multispecies assemblages, ecosystem development, and environmental change (Eds. P. C. de Ruiter, V. Wolters & J. C. Moore) Academic Press.

11. A. I. Dell, G. D. Kokkoris, C. Banasek-Richter, L. Bersier, J. A. Dunne, M. Kondoh, T. Romanuk and N. D. Martinez (2006) How do complex food webs persist in nature? In: Dynamic Food Webs: Multispecies assemblages, ecosystem development, and environmental change (Eds. P. C. de Ruiter, V. Wolters & J. C. Moore) Academic Press.

12. M. Kondoh (2005) Is biodiversity maintained by food-web complexity? -The adaptive food-web hypothesis. In: Aquatic Food Webs: an Ecosystem Approach (Eds. A. Belgrano, U. Scharler, J. Dunne & B. Ulanowicz; ISBN 0-19-856482-1) Oxford University Press.